STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51900Hypothetical protein; Nsp51900; ORF_ID:nsp51900. (196 aa)    
Predicted Functional Partners:
NSP_1060
Transposase; Nsp1060; ORF_ID:nsp1060.
 
     0.943
NSP_23700
Transposase; Nsp23700; ORF_ID:nsp23700.
 
     0.815
NSP_51890
Hypothetical protein; Nsp51890; ORF_ID:nsp51890.
 
     0.607
NSP_38340
Hypothetical protein; Nsp38340; ORF_ID:nsp38340.
  
     0.514
NSP_35740
Hypothetical protein; Nsp35740; ORF_ID:nsp35740.
  
     0.475
NSP_51910
Transposase; Nsp51910; ORF_ID:nsp51910.
       0.463
NSP_33980
CRISPR-associated RAMP, Csx10 family; Nsp33980; ORF_ID:nsp33980.
  
     0.449
NSP_33930
DUF324 domain-containing protein; Nsp33930; ORF_ID:nsp33930.
  
     0.434
NSP_25050
3-oxoacyl-[acyl-carrier protein] reductase; Nsp25050; ORF_ID:nsp25050.
  
     0.423
NSP_28860
Hypothetical protein; Nsp28860; ORF_ID:nsp28860.
  
     0.415
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.