STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_52130Hypothetical protein; Nsp52130; ORF_ID:nsp52130. (120 aa)    
Predicted Functional Partners:
NSP_52140
DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Nsp52140; ORF_ID:nsp52140.
 
     0.801
NSP_28520
Hypothetical protein; Nsp28520; ORF_ID:nsp28520.
  
     0.769
NSP_18060
Hypothetical protein; Nsp18060; ORF_ID:nsp18060.
  
     0.738
NSP_19800
Hypothetical protein; Nsp19800; ORF_ID:nsp19800.
  
     0.736
NSP_52270
WD40 repeat protein; Nsp52270; ORF_ID:nsp52270.
  
     0.722
NSP_39960
Hypothetical protein; Nsp39960; ORF_ID:nsp39960.
  
     0.719
NSP_36410
Hypothetical protein; Nsp36410; ORF_ID:nsp36410.
  
     0.713
NSP_32530
Hypothetical protein; Nsp32530; ORF_ID:nsp32530.
  
     0.708
NSP_6450
Hypothetical protein; Nsp6450; ORF_ID:nsp6450.
  
     0.705
NSP_32080
Hypothetical protein; Nsp32080; ORF_ID:nsp32080.
  
     0.697
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.