STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_52150Anti-sigma regulatory factor (Ser/Thr protein kinase), essential for photomixotrophic growth, PmgA; Nsp52150; ORF_ID:nsp52150. (150 aa)    
Predicted Functional Partners:
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
  
 
 0.983
NSP_12830
Anti-sigma F factor antagonist (spoIIAA-2); Nsp12830; ORF_ID:nsp12830.
 
 0.916
NSP_32260
Undecaprenyl-phosphate galactosephosphotransferase; Nsp32260; ORF_ID:nsp32260; Belongs to the anti-sigma-factor antagonist family.
  
 0.907
NSP_6540
Anti-sigma F factor antagonist (spoIIAA-2); Nsp6540; ORF_ID:nsp6540; Belongs to the anti-sigma-factor antagonist family.
 
 0.899
NSP_8730
Serine phosphatase RsbU, regulator of sigma subunit; Nsp8730; ORF_ID:nsp8730.
 
 0.897
NSP_35990
Anti-sigma F factor antagonist (spoIIAA-2); Nsp35990; ORF_ID:nsp35990; Belongs to the anti-sigma-factor antagonist family.
  
 0.886
NSP_39220
Putative anti-sigma factor antagonist; Nsp39220; ORF_ID:nsp39220; Belongs to the anti-sigma-factor antagonist family.
  
 0.886
NSP_11750
Serine phosphatase RsbU, regulator of sigma subunit; Nsp11750; ORF_ID:nsp11750.
  
 0.860
NSP_6550
Serine phosphatase RsbU, regulator of sigma subunit; Nsp6550; ORF_ID:nsp6550.
  
 0.777
cofH
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
   
    0.739
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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