STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_52840Retinal pigment epithelial membrane protein; Nsp52840; ORF_ID:nsp52840. (492 aa)    
Predicted Functional Partners:
NSP_37350
Hypothetical protein; Nsp37350; ORF_ID:nsp37350.
  
  
  0.757
NSP_52850
Folate transporter 3; Nsp52850; ORF_ID:nsp52850.
       0.574
NSP_52860
Hypothetical protein; Nsp52860; ORF_ID:nsp52860.
       0.541
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 
 0.521
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
  
 
 0.518
argH
Argininosuccinate lyase; Nsp9570; ORF_ID:nsp9570.
 
      0.483
NSP_24490
Phytoene synthase; Nsp24490; ORF_ID:nsp24490.
     
 0.450
NSP_52870
Hypothetical protein; Nsp52870; ORF_ID:nsp52870.
       0.412
NSP_13590
Acyl carrier protein; Nsp13590; ORF_ID:nsp13590.
  
     0.404
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.