STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_53080Hypothetical protein; Nsp53080; ORF_ID:nsp53080. (667 aa)    
Predicted Functional Partners:
NSP_4130
Succinate dehydrogenase iron-sulfur protein; Nsp4130; ORF_ID:nsp4130; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.998
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.986
NSP_45330
Putative oxidoreductase protein; Nsp45330; ORF_ID:nsp45330.
  
 0.950
NSP_41440
Ferredoxin; Nsp41440; ORF_ID:nsp41440.
  
 0.929
NSP_39540
Citrate synthase (si); Nsp39540; ORF_ID:nsp39540; Belongs to the citrate synthase family.
  
 0.901
NSP_5980
Succinyl-CoA ligase [ADP-forming] beta chain; Nsp5980; ORF_ID:nsp5980.
  
 0.896
NSP_5990
Succinyl-CoA ligase [ADP-forming] alpha chain; Nsp5990; ORF_ID:nsp5990.
  
 0.889
NSP_28030
NAD-reducing hydrogenase subunit HoxF; Nsp28030; ORF_ID:nsp28030.
   
 
 0.874
ndhH
NAD(P)H-quinone oxidoreductase chain H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
   
 
 0.868
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.861
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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