STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_5410Deacetylase; Nsp5410; ORF_ID:nsp5410. (306 aa)    
Predicted Functional Partners:
NSP_3970
Chaperone protein HtpG; Nsp3970; ORF_ID:nsp3970.
    
 0.955
NSP_34990
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.912
NSP_44660
WD-40 repeat protein; Nsp44660; ORF_ID:nsp44660.
    
 0.885
NSP_22650
Superfamily II DNA/RNA helicase, SNF2 family; Nsp22650; ORF_ID:nsp22650.
    
 0.878
NSP_22670
SNF2 helicase; Nsp22670; ORF_ID:nsp22670.
    
 0.878
NSP_2510
Helicase, SNF2/RAD54 family; Nsp2510; ORF_ID:nsp2510.
    
 0.878
NSP_27120
Putative ATP-dependent helicase; Nsp27120; ORF_ID:nsp27120.
    
 0.878
NSP_39810
Superfamily II DNA/RNA helicase, SNF2 family; Nsp39810; ORF_ID:nsp39810.
    
 0.878
NSP_14470
Uridine kinase; Nsp14470; ORF_ID:nsp14470.
   
  0.829
NSP_35790
Phosphoribulokinase; Nsp35790; ORF_ID:nsp35790.
   
  0.829
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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