STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_5890UDP-glucose 4-epimerase; Nsp5890; ORF_ID:nsp5890; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (332 aa)    
Predicted Functional Partners:
NSP_29650
dTDP-glucose 4,6-dehydratase; Nsp29650; ORF_ID:nsp29650; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.737
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
  
 0.633
NSP_13050
UDP-glucose dehydrogenase; Nsp13050; ORF_ID:nsp13050.
  
 
 0.624
NSP_5800
Galactose mutarotase; Nsp5800; ORF_ID:nsp5800.
  
 
 0.624
NSP_1760
Glucose-1-phosphate thymidylyltransferase; Nsp1760; ORF_ID:nsp1760.
    
 0.623
NSP_1770
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
    
 0.614
NSP_50010
UDP-glucose dehydrogenase; Nsp50010; ORF_ID:nsp50010; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
    
  0.531
NSP_13060
dTDP-glucose 4,6-dehydratase; Nsp13060; ORF_ID:nsp13060.
   
 
0.528
glk
Glucokinase; Nsp21670; ORF_ID:nsp21670; Belongs to the bacterial glucokinase family.
     
 0.512
NSP_44070
Nucleoside-diphosphate-sugar epimerase; Nsp44070; ORF_ID:nsp44070.
    
 
0.499
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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