STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_6870Hypothetical protein; Nsp6870; ORF_ID:nsp6870. (190 aa)    
Predicted Functional Partners:
hemF
Coproporphyrinogen III oxidase, aerobic; Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.
 
      0.824
NSP_14550
Coproporphyrinogen III oxidase, aerobic; Nsp14550; ORF_ID:nsp14550.
 
      0.597
NSP_6860
Putative restriction /modification enzyme; Nsp6860; ORF_ID:nsp6860.
       0.566
NSP_6880
Hypothetical protein; Nsp6880; ORF_ID:nsp6880.
       0.487
NSP_6840
Putative restriction /modification enzyme; Nsp6840; ORF_ID:nsp6840.
       0.461
NSP_6850
Putative restriction /modification enzyme; Nsp6850; ORF_ID:nsp6850.
       0.461
NSP_37240
23S rRNA protein; Nsp37240; ORF_ID:nsp37240.
  
     0.450
NSP_6890
Hypothetical protein; Nsp6890; ORF_ID:nsp6890.
  
    0.417
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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