STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_6890Hypothetical protein; Nsp6890; ORF_ID:nsp6890. (150 aa)    
Predicted Functional Partners:
NSP_20290
Hypothetical protein; Nsp20290; ORF_ID:nsp20290.
 
 
 0.801
NSP_28200
VapC toxin protein; Nsp28200; ORF_ID:nsp28200.
  
     0.761
NSP_27590
Hypothetical protein; Nsp27590; ORF_ID:nsp27590.
  
     0.760
NSP_20280
VapC toxin protein; Nsp20280; ORF_ID:nsp20280.
  
     0.754
NSP_28570
PilT protein, N-terminal; Nsp28570; ORF_ID:nsp28570.
  
     0.703
NSP_11510
Putative nucleic acid-binding protein, contains PIN domain; Nsp11510; ORF_ID:nsp11510.
  
     0.686
NSP_6880
Hypothetical protein; Nsp6880; ORF_ID:nsp6880.
       0.645
NSP_34100
Antitoxin of toxin-antitoxin stability system; Nsp34100; ORF_ID:nsp34100.
   
   0.439
NSP_14090
Hypothetical protein; Nsp14090; ORF_ID:nsp14090.
  
 
   0.426
NSP_6870
Hypothetical protein; Nsp6870; ORF_ID:nsp6870.
  
    0.417
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.