STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_7080Putative transcriptional regulators; Nsp7080; ORF_ID:nsp7080. (157 aa)    
Predicted Functional Partners:
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
   
 0.869
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.848
NSP_33190
Circadian input kinase A; Nsp33190; ORF_ID:nsp33190.
    
 0.838
NSP_10510
Ferredoxin-dependent glutamate synthase; Nsp10510; ORF_ID:nsp10510.
    
 0.827
NSP_16180
Glutamine synthetase type I; Nsp16180; ORF_ID:nsp16180.
  
 
 0.813
NSP_46050
Hypothetical protein; Nsp46050; ORF_ID:nsp46050.
   
 0.809
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.795
NSP_15330
NADP-dependent malic enzyme; Nsp15330; ORF_ID:nsp15330.
     
 0.794
NSP_44660
WD-40 repeat protein; Nsp44660; ORF_ID:nsp44660.
  
   0.790
NSP_17890
DNA-directed RNA polymerase omega subunit; Nsp17890; ORF_ID:nsp17890.
    
   0.788
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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