STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_7210Homogentisate prenyltransferase; Nsp7210; ORF_ID:nsp7210. (312 aa)    
Predicted Functional Partners:
NSP_29310
2-methyl-6-phytyl-1,4-benzoquinone cyclase; Nsp29310; ORF_ID:nsp29310.
 
  
 0.925
NSP_46210
Geranylgeranyl hydrogenase BchP; Nsp46210; ORF_ID:nsp46210.
 
 
 0.905
NSP_7200
Gamma-tocopherol C-methyltransferase; Nsp7200; ORF_ID:nsp7200; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
 
  
 0.890
NSP_28960
4-hydroxyphenylpyruvate dioxygenase; Nsp28960; ORF_ID:nsp28960.
  
  
 0.862
NSP_25820
Protoporphyrin IX Mg-chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.773
NSP_7220
Hypothetical protein; Nsp7220; ORF_ID:nsp7220.
       0.773
NSP_25110
Mg-protoporphyrin O-methyltransferase; Nsp25110; ORF_ID:nsp25110.
  
  0.762
NSP_35420
Lycopene cyclase, CruP type; Nsp35420; ORF_ID:nsp35420.
 
 
 0.760
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.758
atpD-2
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.758
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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