Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tyrSTyrosyl-tRNA synthetase cluster 1; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (431 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase beta chain; Nsp15080; ORF_ID:nsp15080; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
  
 0.934
NSP_29090
Methionyl-tRNA synthetase; Nsp29090; ORF_ID:nsp29090.
  
 0.920
NSP_29100
Methionyl-tRNA synthetase; Nsp29100; ORF_ID:nsp29100; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.920
gltX
Glutamyl-tRNA synthetase Glutamyl-tRNA(Gln) synthetase unambiguous; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
 
 0.886
leuS
Leucyl-tRNA synthetase; Nsp1300; ORF_ID:nsp1300; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.879
argS
Arginyl-tRNA synthetase; Nsp36250; ORF_ID:nsp36250.
  
  
 0.840
proS
Prolyl-tRNA synthetase Bacterial type; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing a [...]
 
 
 0.809
thrS
Threonyl-tRNA synthetase; Nsp44240; ORF_ID:nsp44240; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.805
NSP_35830
Hemolysins and proteins containing CBS domains; Nsp35830; ORF_ID:nsp35830.
  
 0.798
NSP_4570
Hypothetical protein; Nsp4570; ORF_ID:nsp4570.
  
 0.798
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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