STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_7690Glycogen branching enzyme, GH-57-type, archaeal; Nsp7690; ORF_ID:nsp7690; Belongs to the glycosyl hydrolase 57 family. (506 aa)    
Predicted Functional Partners:
NSP_6360
Glycosyl transferase, group 1; Nsp6360; ORF_ID:nsp6360.
 
 
  0.968
NSP_39450
Trehalose synthase; Nsp39450; ORF_ID:nsp39450.
     
 0.823
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
 
  
  0.819
NSP_5760
Phosphate-binding protein; Nsp5760; ORF_ID:nsp5760.
 
     0.752
NSP_50680
Glycogen phosphorylase; Nsp50680; ORF_ID:nsp50680.
 
  
 0.740
NSP_13800
Beta-1,3-glucosyltransferase; Nsp13800; ORF_ID:nsp13800.
   
 
 0.652
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
     
 0.625
NSP_17870
Neopullulanase; Nsp17870; ORF_ID:nsp17870.
     
 0.624
NSP_33020
Cytoplasmic alpha-amylase; Nsp33020; ORF_ID:nsp33020.
     
 0.624
glgA
Glycogen synthase, ADP-glucose transglucosylase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
  0.624
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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