STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_8440Hypothetical protein; Nsp8440; ORF_ID:nsp8440. (269 aa)    
Predicted Functional Partners:
NSP_8430
Hypothetical protein; Nsp8430; ORF_ID:nsp8430.
       0.773
NSP_4180
YggT family protein YlmG; Nsp4180; ORF_ID:nsp4180; required for proper distribution of nucleoids in chloroplast and cyanobacteria.
  
     0.739
NSP_14310
Photosystem II manganese-stabilizing protein (PsbO); Nsp14310; ORF_ID:nsp14310.
  
     0.725
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.699
NSP_30870
Hypothetical protein; Nsp30870; ORF_ID:nsp30870.
  
     0.698
NSP_36850
Branched-chain amino acid permease; Nsp36850; ORF_ID:nsp36850.
  
     0.692
NSP_14150
Photosystem II stability/assembly factor HCF136/Ycf48; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.680
NSP_12760
Hypothetical protein; Nsp12760; ORF_ID:nsp12760.
  
     0.673
NSP_11050
Conserved NnrU/NnuR membrane enzyme; Nsp11050; ORF_ID:nsp11050.
  
     0.671
NSP_5950
Hypothetical protein; Nsp5950; ORF_ID:nsp5950.
  
     0.671
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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