STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_8510Glycosyltransferase; Nsp8510; ORF_ID:nsp8510. (351 aa)    
Predicted Functional Partners:
NSP_10540
Mannose-6-phosphate isomerase; Nsp10540; ORF_ID:nsp10540.
 
 
 
  0.884
NSP_44290
Glycogen debranching enzyme; Nsp44290; ORF_ID:nsp44290.
 
  0.866
NSP_26000
Glycogen debranching enzyme; Nsp26000; ORF_ID:nsp26000.
 
 
  0.845
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
  
 0.597
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.585
NSP_41880
Malto-oligosyltrehalose trehalohydrolase; Nsp41880; ORF_ID:nsp41880.
   
  0.585
NSP_8520
Hypothetical protein; Nsp8520; ORF_ID:nsp8520.
       0.572
NSP_8530
Hypothetical protein; Nsp8530; ORF_ID:nsp8530.
       0.572
NSP_39450
Trehalose synthase; Nsp39450; ORF_ID:nsp39450.
    
 0.567
NSP_8540
Sorbitol dehydrogenase; Nsp8540; ORF_ID:nsp8540.
  
    0.518
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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