STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_90Beta-lactamase; Nsp90; ORF_ID:nsp90. (501 aa)    
Predicted Functional Partners:
trmJ
tRNA:Cm32/Um32 methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.556
NSP_47350
Hypothetical protein; Nsp47350; ORF_ID:nsp47350.
 
     0.519
NSP_30900
Metal-binding, possibly nucleic acid-binding protein; Nsp30900; ORF_ID:nsp30900.
  
     0.502
NSP_110
Hypothetical protein; Nsp110; ORF_ID:nsp110.
       0.472
NSP_32450
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.464
NSP_32410
Hypothetical protein; Nsp32410; ORF_ID:nsp32410.
  
     0.432
NSP_11690
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Nsp11690; ORF_ID:nsp11690.
  
     0.425
NSP_28090
Hypothetical protein; Nsp28090; ORF_ID:nsp28090.
  
     0.421
NSP_3690
Hypothetical protein; Nsp3690; ORF_ID:nsp3690.
  
     0.406
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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