STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_9430Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase; Nsp9430; ORF_ID:nsp9430. (172 aa)    
Predicted Functional Partners:
NSP_13800
Beta-1,3-glucosyltransferase; Nsp13800; ORF_ID:nsp13800.
  
 
  0.766
NSP_37990
Glycosyl transferase, family 2; Nsp37990; ORF_ID:nsp37990.
  
     0.762
NSP_12950
Glycosyl transferase, family 2; Nsp12950; ORF_ID:nsp12950.
  
  
  0.755
NSP_1800
Hypothetical protein; Nsp1800; ORF_ID:nsp1800.
  
  
  0.747
NSP_3250
Putative glycosyl transferase; Nsp3250; ORF_ID:nsp3250.
  
     0.736
NSP_46400
Glycosyl transferase, family 2; Nsp46400; ORF_ID:nsp46400.
  
     0.724
NSP_14800
Putative glycosyl transferase; Nsp14800; ORF_ID:nsp14800.
  
  
  0.676
NSP_34600
Putative glycosyl transferase; Nsp34600; ORF_ID:nsp34600.
  
  
  0.625
rplS
LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
       0.521
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
  
 0.516
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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