STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_97604-alpha-glucanotransferase (amylomaltase); Nsp9760; ORF_ID:nsp9760. (502 aa)    
Predicted Functional Partners:
NSP_41870
Malto-oligosyltrehalose synthase; Nsp41870; ORF_ID:nsp41870.
 
 
 0.982
NSP_17870
Neopullulanase; Nsp17870; ORF_ID:nsp17870.
 
 0.971
NSP_50680
Glycogen phosphorylase; Nsp50680; ORF_ID:nsp50680.
  
 
 0.962
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.938
NSP_39450
Trehalose synthase; Nsp39450; ORF_ID:nsp39450.
 
 
 0.931
glgA
Glycogen synthase, ADP-glucose transglucosylase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.883
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
    
 0.853
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
  
 0.785
NSP_41880
Malto-oligosyltrehalose trehalohydrolase; Nsp41880; ORF_ID:nsp41880.
 
 0.783
NSP_12230
Glycogen debranching enzyme; Nsp12230; ORF_ID:nsp12230; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.714
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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