STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_990Putative extracellular nuclease; Nsp990; ORF_ID:nsp990. (348 aa)    
Predicted Functional Partners:
NSP_38120
4-Hydroxy-2-oxoglutarate aldolase; Nsp38120; ORF_ID:nsp38120.
   
  
 0.741
NSP_35450
Cytochrome P450; Nsp35450; ORF_ID:nsp35450.
  
     0.720
NSP_37320
Hypothetical protein; Nsp37320; ORF_ID:nsp37320.
  
     0.670
NSP_1000
Hypothetical protein; Nsp1000; ORF_ID:nsp1000.
       0.645
NSP_43410
ATPase; Nsp43410; ORF_ID:nsp43410.
  
     0.645
NSP_49460
GUN4-like protein; Nsp49460; ORF_ID:nsp49460.
  
     0.548
NSP_13220
Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain; Nsp13220; ORF_ID:nsp13220.
  
     0.478
NSP_46940
Hypothetical protein; Nsp46940; ORF_ID:nsp46940.
  
     0.473
NSP_12260
Serine/threonine kinase; Nsp12260; ORF_ID:nsp12260.
  
     0.472
NSP_4180
YggT family protein YlmG; Nsp4180; ORF_ID:nsp4180; required for proper distribution of nucleoids in chloroplast and cyanobacteria.
  
     0.467
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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