Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAU71127.1Possible amidase enhancer; COG2385 Sporulation protein and related proteins. (515 aa)    
Predicted Functional Partners:
EAU71126.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
       0.770
EAU71125.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
       0.701
rpmI
COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.659
EAU71130.1
COG0457 FOG: TPR repeat.
 
     0.629
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.575
EAU71572.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.469
EAU71459.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
     0.444
EAU71675.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Synechococcus sp. BL107
NCBI taxonomy Id: 313625
Other names: S. sp. BL107
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