STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU71135.1SqdX; COG0438 Glycosyltransferase. (382 aa)    
Predicted Functional Partners:
EAU71134.1
Sulfolipid (UDP-sulfoquinovose) biosynthesis protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.939
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.761
EAU71024.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.682
EAU70331.1
Alpha amylase, catalytic subdomain; COG0366 Glycosidases.
    
 0.635
EAU71096.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
  
 0.614
EAU71141.1
Hypothetical protein; COG0381 UDP-N-acetylglucosamine 2-epimerase.
  
 
 0.613
EAU72299.1
COG1216 Predicted glycosyltransferases.
  
 0.606
EAU71136.1
COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
  0.561
EAU71138.1
Putative aminotransferase (degT family) protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.546
EAU71133.1
High light-inducible protein-like.
       0.537
Your Current Organism:
Synechococcus sp. BL107
NCBI taxonomy Id: 313625
Other names: S. sp. BL107
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