Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU71343.1 | EAU71344.1 | BL107_07419 | BL107_07424 | Hypothetical protein. | Hypothetical protein. | 0.608 |
EAU71343.1 | EAU71345.1 | BL107_07419 | BL107_07429 | Hypothetical protein. | Possible kinase; COG0661 Predicted unusual protein kinase. | 0.608 |
EAU71343.1 | argJ | BL107_07419 | BL107_07414 | Hypothetical protein. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.446 |
EAU71344.1 | EAU71343.1 | BL107_07424 | BL107_07419 | Hypothetical protein. | Hypothetical protein. | 0.608 |
EAU71344.1 | EAU71345.1 | BL107_07424 | BL107_07429 | Hypothetical protein. | Possible kinase; COG0661 Predicted unusual protein kinase. | 0.819 |
EAU71345.1 | EAU71343.1 | BL107_07429 | BL107_07419 | Possible kinase; COG0661 Predicted unusual protein kinase. | Hypothetical protein. | 0.608 |
EAU71345.1 | EAU71344.1 | BL107_07429 | BL107_07424 | Possible kinase; COG0661 Predicted unusual protein kinase. | Hypothetical protein. | 0.819 |
argJ | EAU71343.1 | BL107_07414 | BL107_07419 | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Hypothetical protein. | 0.446 |