STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU70334.1Alpha amylase, catalytic subdomain; COG0366 Glycosidases. (480 aa)    
Predicted Functional Partners:
EAU70761.1
Glycoside hydrolase, family 77; COG1640 4-alpha-glucanotransferase.
 
 
 0.953
EAU70331.1
Alpha amylase, catalytic subdomain; COG0366 Glycosidases.
 
0.928
EAU72371.1
Alpha amylase, catalytic subdomain; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
 
 0.741
EAU71196.1
Sucrose-phosphate synthase; COG0438 Glycosyltransferase.
   
 0.739
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.701
EAU72299.1
COG1216 Predicted glycosyltransferases.
     
 0.682
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.635
EAU71008.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.628
EAU70333.1
COG0554 Glycerol kinase; Belongs to the FGGY kinase family.
     
 0.578
EAU70332.1
COG0578 Glycerol-3-phosphate dehydrogenase.
     
 0.568
Your Current Organism:
Synechococcus sp. BL107
NCBI taxonomy Id: 313625
Other names: S. sp. BL107
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