STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU71790.1Phage SPO1 DNA polymerase-related protein; COG1573 Uracil-DNA glycosylase. (187 aa)    
Predicted Functional Partners:
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.800
EAU71791.1
Hypothetical protein.
       0.773
EAU71070.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.671
EAU70171.1
Hypothetical protein; COG0629 Single-stranded DNA-binding protein.
    
   0.671
EAU71788.1
Peptidase S41A; C-terminal protease; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
    0.651
EAU71792.1
Aminotransferase class-I; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.607
EAU70884.1
Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
    0.528
EAU71793.1
Phosphonate-binding periplasmic protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
       0.513
EAU71794.1
ATPase; COG3638 ABC-type phosphate/phosphonate transport system, ATPase component.
       0.513
EAU71795.1
COG3639 ABC-type phosphate/phosphonate transport system, permease component.
       0.513
Your Current Organism:
Synechococcus sp. BL107
NCBI taxonomy Id: 313625
Other names: S. sp. BL107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.