STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27778.1Chemotaxis MotB protein, putative; COG1360 Flagellar motor protein. (265 aa)    
Predicted Functional Partners:
EDM27477.1
Putative two-component system sensor kinase/response regulator fusion protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 0.975
EDM29697.1
Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase).
  
 
 0.838
EDM27779.1
Hypothetical protein.
       0.773
EDM27163.1
OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
 0.719
EDM27162.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
 0.675
EDM27777.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
     
 0.617
radC
DNA repair protein RadC; COG2198 FOG: HPt domain.
  
  
 0.596
EDM28995.1
COG0784 FOG: CheY-like receiver.
  
  
 0.581
EDM25123.1
Periplasmic Sensor Hybrid Histidine Kinase; COG0642 Signal transduction histidine kinase.
  
  
 0.562
EDM25580.1
Transcriptional regulator; COG0642 Signal transduction histidine kinase.
  
  
 0.562
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.