STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27839.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
EDM28890.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.770
EDM27838.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.610
EDM27837.1
Hypothetical protein.
 
    
0.565
EDM27840.1
Hypothetical protein.
       0.521
EDM28201.1
Hypothetical protein.
  
     0.485
EDM27324.1
Hypothetical protein.
  
     0.441
EDM28820.1
Hypothetical protein.
  
     0.423
EDM28909.1
Pilus biogenesis protein and ABC-type transporter; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.411
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.