STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27881.1ABC transporter, permease protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (254 aa)    
Predicted Functional Partners:
EDM27882.1
ABC transporter related protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.981
EDM27880.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.970
EDM26256.1
Nitrate transport ATP-binding subunits C and D; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.876
EDM26645.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.757
EDM26255.1
COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
     0.700
EDM26646.1
Regulatory protein, AsnC/Lrp; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
  0.687
EDM28351.1
Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.648
EDM24773.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
  0.609
EDM26254.1
Twin-arginine translocation pathway signal; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 0.584
EDM26644.1
2-isopropylmalate synthase-like protein; Similar to yeast 2-isopropylmalate synthase; COG1196 Chromosome segregation ATPases.
  
     0.534
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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