STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27907.1ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (319 aa)    
Predicted Functional Partners:
EDM27911.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.904
EDM27908.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  0.892
EDM27910.1
Hypothetical protein; COG1251 NAD(P)H-nitrite reductase.
 
     0.886
EDM26256.1
Nitrate transport ATP-binding subunits C and D; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 
0.876
EDM27909.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.857
EDM27904.1
Hypothetical protein; COG1340 Uncharacterized archaeal coiled-coil protein.
       0.773
EDM27905.1
ATPase, AAA family protein; COG0714 MoxR-like ATPases.
       0.773
EDM27906.1
Hypothetical protein.
       0.773
EDM26264.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.768
EDM27228.1
Probable permease component of an ABC-transporter.
  
  0.759
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.