STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27921.1Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG. (52 aa)    
Predicted Functional Partners:
EDM28890.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.749
EDM27922.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.705
EDM27923.1
Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); COG3119 Arylsulfatase A and related enzymes.
       0.705
EDM28201.1
Hypothetical protein.
  
     0.598
EDM28909.1
Pilus biogenesis protein and ABC-type transporter; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.592
EDM27919.1
COG3669 Alpha-L-fucosidase.
       0.523
EDM27920.1
N-acetylgalactosamine 6-sulfatase (GALNS); COG3119 Arylsulfatase A and related enzymes.
       0.523
EDM27924.1
COG3119 Arylsulfatase A and related enzymes.
       0.519
EDM27918.1
Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.501
EDM26670.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.