STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27987.1Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG2188 Transcriptional regulators. (474 aa)    
Predicted Functional Partners:
EDM28590.1
Putative binding protein dependent transport protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.855
EDM28591.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.821
EDM27738.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.818
EDM28592.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
  
  0.804
EDM27737.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.800
EDM27245.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.798
EDM28161.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.797
EDM27244.1
COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.796
EDM28162.1
COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.794
EDM27988.1
Na+/glucose cotransporter; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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