STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27994.1Hypothetical protein. (983 aa)    
Predicted Functional Partners:
EDM27993.1
Regucalcin family protein; COG3386 Gluconolactonase.
       0.752
EDM27991.1
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.741
EDM27992.1
Glutamate-1-semialdehyde-2,1-aminomutase; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.741
EDM27995.1
Hypothetical protein; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
       0.737
EDM27996.1
Hypothetical protein.
      
0.737
EDM27987.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG2188 Transcriptional regulators.
       0.710
EDM27988.1
Na+/glucose cotransporter; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.710
EDM27989.1
3-oxoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.710
EDM27990.1
Hypothetical protein.
       0.710
EDM27986.1
D-lactate dehydrogenase, putative; COG0277 FAD/FMN-containing dehydrogenases.
       0.437
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.