STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25808.1Lipopolysaccharide biosynthesis protein; COG0673 Predicted dehydrogenases and related proteins. (350 aa)    
Predicted Functional Partners:
EDM27555.1
Probable trehalosemaltose utilization protein, function; COG0673 Predicted dehydrogenases and related proteins.
  
     0.773
EDM29430.1
COG0673 Predicted dehydrogenases and related proteins.
  
     0.767
EDM26579.1
Oxidoreductase family, NAD-binding Rossmann fold domain protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.766
EDM28761.1
Oxidoreductase, putative; COG0673 Predicted dehydrogenases and related proteins.
  
     0.745
EDM26210.1
Glycerol-3-phosphate cytidyltransferase; COG0615 Cytidylyltransferase.
  
     0.677
EDM26354.1
COG0673 Predicted dehydrogenases and related proteins.
  
     0.621
EDM28728.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.597
EDM25807.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
    
0.554
EDM25809.1
Hypothetical protein.
       0.476
EDM25810.1
Endonuclease/exonuclease/phosphatase family protein; COG3568 Metal-dependent hydrolase.
       0.457
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.