Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM26543.1 | EDM26544.1 | LNTAR_02007 | LNTAR_02012 | Hypothetical protein. | DedA. | 0.536 |
EDM26543.1 | EDM26545.1 | LNTAR_02007 | LNTAR_02017 | Hypothetical protein. | Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators. | 0.433 |
EDM26543.1 | rpsO | LNTAR_02007 | LNTAR_03914 | Hypothetical protein. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.406 |
EDM26543.1 | rpsU | LNTAR_02007 | LNTAR_15972 | Hypothetical protein. | COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.917 |
EDM26544.1 | EDM26543.1 | LNTAR_02012 | LNTAR_02007 | DedA. | Hypothetical protein. | 0.536 |
EDM26544.1 | EDM26545.1 | LNTAR_02012 | LNTAR_02017 | DedA. | Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators. | 0.473 |
EDM26545.1 | EDM26543.1 | LNTAR_02017 | LNTAR_02007 | Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators. | Hypothetical protein. | 0.433 |
EDM26545.1 | EDM26544.1 | LNTAR_02017 | LNTAR_02012 | Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators. | DedA. | 0.473 |
rpsO | EDM26543.1 | LNTAR_03914 | LNTAR_02007 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Hypothetical protein. | 0.406 |
rpsO | rpsU | LNTAR_03914 | LNTAR_15972 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.987 |
rpsU | EDM26543.1 | LNTAR_15972 | LNTAR_02007 | COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Hypothetical protein. | 0.917 |
rpsU | rpsO | LNTAR_15972 | LNTAR_03914 | COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.987 |