STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26604.1Xylose operon regulatory protein; COG1609 Transcriptional regulators. (375 aa)    
Predicted Functional Partners:
EDM29520.1
COG0067 Glutamate synthase domain 1.
   
 0.812
EDM26716.1
COG0067 Glutamate synthase domain 1.
   
 0.812
EDM27550.1
COG1609 Transcriptional regulators.
  
     0.720
EDM28159.1
COG1609 Transcriptional regulators.
  
 
 0.716
EDM28930.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.709
EDM28156.1
Transcriptional regulator, GntR family / Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators.
  
 
 0.704
EDM25015.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
     0.700
EDM26545.1
Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators.
  
     0.696
EDM29507.1
Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators.
  
     0.694
EDM28730.1
Arabinose operon transcriptional repressor; COG1609 Transcriptional regulators.
  
     0.676
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.