STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26628.1Sucrose phosphorylase; COG0366 Glycosidases. (568 aa)    
Predicted Functional Partners:
EDM26626.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
   
 0.981
EDM26627.1
COG3769 Predicted hydrolase (HAD superfamily).
 
     0.896
EDM24800.1
COG0531 Amino acid transporters.
    
 0.775
EDM28166.1
Na-K-Cl cotransporter, putative; COG0531 Amino acid transporters.
    
 0.711
EDM29254.1
Possible glycosyl hydrolase; COG3664 Beta-xylosidase.
     
 0.617
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.540
EDM26629.1
Hypothetical protein.
       0.487
EDM25184.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.481
EDM27753.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.477
EDM28930.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.447
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.