Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM25097.1 | EDM25098.1 | LNTAR_02774 | LNTAR_02779 | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | 0.537 |
| EDM25097.1 | EDM25099.1 | LNTAR_02774 | LNTAR_02784 | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | COG0564 Pseudouridylate synthases, 23S RNA-specific. | 0.666 |
| EDM25097.1 | EDM25100.1 | LNTAR_02774 | LNTAR_02789 | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | 0.417 |
| EDM25097.1 | EDM25101.1 | LNTAR_02774 | LNTAR_02794 | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.417 |
| EDM25098.1 | EDM25097.1 | LNTAR_02779 | LNTAR_02774 | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.537 |
| EDM25098.1 | EDM25099.1 | LNTAR_02779 | LNTAR_02784 | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | COG0564 Pseudouridylate synthases, 23S RNA-specific. | 0.803 |
| EDM25098.1 | EDM25100.1 | LNTAR_02779 | LNTAR_02789 | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | 0.584 |
| EDM25098.1 | EDM25101.1 | LNTAR_02779 | LNTAR_02794 | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | Hypothetical protein. | 0.584 |
| EDM25099.1 | EDM25097.1 | LNTAR_02784 | LNTAR_02774 | COG0564 Pseudouridylate synthases, 23S RNA-specific. | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.666 |
| EDM25099.1 | EDM25098.1 | LNTAR_02784 | LNTAR_02779 | COG0564 Pseudouridylate synthases, 23S RNA-specific. | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | 0.803 |
| EDM25099.1 | EDM25100.1 | LNTAR_02784 | LNTAR_02789 | COG0564 Pseudouridylate synthases, 23S RNA-specific. | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | 0.584 |
| EDM25099.1 | EDM25101.1 | LNTAR_02784 | LNTAR_02794 | COG0564 Pseudouridylate synthases, 23S RNA-specific. | Hypothetical protein. | 0.584 |
| EDM25100.1 | EDM25097.1 | LNTAR_02789 | LNTAR_02774 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.417 |
| EDM25100.1 | EDM25098.1 | LNTAR_02789 | LNTAR_02779 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | Glutamine amidotransferase, class-II; COG0121 Predicted glutamine amidotransferase. | 0.584 |
| EDM25100.1 | EDM25099.1 | LNTAR_02789 | LNTAR_02784 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | COG0564 Pseudouridylate synthases, 23S RNA-specific. | 0.584 |
| EDM25100.1 | EDM25101.1 | LNTAR_02789 | LNTAR_02794 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | Hypothetical protein. | 0.773 |
| EDM25100.1 | EDM25605.1 | LNTAR_02789 | LNTAR_08281 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | Prepilin peptidase; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases. | 0.485 |
| EDM25100.1 | EDM26365.1 | LNTAR_02789 | LNTAR_19877 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | Positive regulator of sigma-B activity; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.554 |
| EDM25100.1 | EDM26366.1 | LNTAR_02789 | LNTAR_19882 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | Indirect negative regulation of sigma B dependant gene expression (serine phosphatase); COG2208 Serine phosphatase RsbU, regulator of sigma subunit. | 0.554 |
| EDM25100.1 | EDM27405.1 | LNTAR_02789 | LNTAR_04816 | Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). | COG1040 Predicted amidophosphoribosyltransferases. | 0.516 |
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