STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25186.1Putative LPS biosynthesis related epimerase; COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (372 aa)    
Predicted Functional Partners:
EDM25187.1
Polysaccharide biosynthesis domain protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
  0.957
EDM25185.1
Putative reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
     0.932
EDM25184.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
 0.831
EDM25182.1
COG0438 Glycosyltransferase.
  
    0.791
EDM25183.1
Mannosyltransferase; COG0438 Glycosyltransferase.
  
    0.791
EDM29047.1
COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.757
EDM29510.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
 0.654
EDM25489.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
 0.654
EDM25188.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
  
 0.618
EDM25196.1
Putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.550
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.