STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25229.1Hypothetical protein; COG0457 FOG: TPR repeat. (738 aa)    
Predicted Functional Partners:
EDM25228.1
batB protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.844
EDM25227.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.828
EDM25225.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.807
EDM25224.1
moxR-type regulator; COG0714 MoxR-like ATPases.
       0.773
EDM25226.1
Hypothetical protein.
       0.773
EDM27154.1
COG0307 Riboflavin synthase alpha chain.
    
  0.600
EDM29690.1
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; COG0807 GTP cyclohydrolase II.
    
  0.594
EDM29691.1
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; In the N-terminal section; belongs to the DHBP synthase family.
    
  0.594
EDM25346.1
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
  0.594
EDM25230.1
Methyltransferase; COG1041 Predicted DNA modification methylase.
       0.568
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.