STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25301.1COG0515 Serine/threonine protein kinase. (218 aa)    
Predicted Functional Partners:
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
    
 0.797
EDM26445.1
Hypothetical protein; COG3509 Poly(3-hydroxybutyrate) depolymerase.
    
 0.779
EDM27777.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
    
 0.701
EDM28543.1
COG0631 Serine/threonine protein phosphatase.
   
 0.685
EDM29525.1
COG2453 Predicted protein-tyrosine phosphatase.
    
 0.622
EDM25157.1
ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
    
 0.596
EDM26966.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
    
 0.550
EDM27573.1
ADP-heptose--LPS heptosyltransferase II, putative; COG0859 ADP-heptose:LPS heptosyltransferase.
   
  0.522
EDM29366.1
Lipopolysaccharide heptosyltransferase II; COG0859 ADP-heptose:LPS heptosyltransferase.
   
  0.522
EDM24754.1
COG1145 Ferredoxin.
    
   0.517
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.