STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25317.1COG0642 Signal transduction histidine kinase. (467 aa)    
Predicted Functional Partners:
EDM27874.1
Adenylyl cyclase class-3/4/guanylyl cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 0.982
EDM28995.1
COG0784 FOG: CheY-like receiver.
 
 
 0.980
EDM29686.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.971
EDM29535.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  0.954
EDM25049.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
 
 
 0.947
EDM27166.1
ATP-binding region, ATPase-like protein; COG0642 Signal transduction histidine kinase.
 
 
0.906
radC
DNA repair protein RadC; COG2198 FOG: HPt domain.
  
 0.905
EDM26653.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  0.904
EDM27895.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  0.859
EDM27392.1
DNA-binding response regulator, excisionase family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  0.858
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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