STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26066.1WD40-like Beta Propeller; COG0823 Periplasmic component of the Tol biopolymer transport system. (407 aa)    
Predicted Functional Partners:
EDM27162.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 0.921
EDM27163.1
OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
 0.895
EDM26064.1
Hypothetical protein.
  
    0.774
xerC
Tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.773
EDM28964.1
COG0811 Biopolymer transport proteins.
  
    0.728
EDM28963.1
COG0848 Biopolymer transport protein.
  
    0.602
EDM29026.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.586
EDM25053.1
COG0539 Ribosomal protein S1.
  
    0.560
EDM28568.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
 0.554
EDM26507.1
Putative TonB2 protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
 
 0.544
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.