STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27394.1Sulfatase; COG3119 Arylsulfatase A and related enzymes. (517 aa)    
Predicted Functional Partners:
EDM27395.1
Glycoside hydrolase family 2, TIM barrel; COG3250 Beta-galactosidase/beta-glucuronidase.
 
   0.830
EDM26187.1
Hypothetical protein.
  
     0.720
EDM26391.1
COG4409 Neuraminidase (sialidase).
  
  
  0.629
EDM28787.1
Twin-arginine translocation pathway signal; COG3119 Arylsulfatase A and related enzymes.
  
     0.599
EDM27927.1
Hypothetical protein.
  
     0.568
EDM29277.1
Hypothetical protein.
  
     0.552
EDM29328.1
Hypothetical protein; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase.
  
     0.540
EDM27397.1
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
    
0.481
EDM26458.1
Hypothetical protein.
  
    0.468
EDM26157.1
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
   0.468
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.