STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27423.1Tetratricopeptide TPR_2; COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit. (756 aa)    
Predicted Functional Partners:
EDM25511.1
COG3119 Arylsulfatase A and related enzymes.
  
     0.743
EDM25503.1
COG3119 Arylsulfatase A and related enzymes.
  
     0.739
EDM25513.1
COG3119 Arylsulfatase A and related enzymes.
  
     0.736
EDM25493.1
Hypothetical protein.
  
     0.632
nrdB
COG0208 Ribonucleotide reductase, beta subunit.
  
    0.630
EDM27424.1
COG0633 Ferredoxin.
       0.625
EDM26467.1
ABC transporter ATP-binding protein; COG1716 FOG: FHA domain.
    
  0.597
EDM27426.1
Ribonucleotide-diphosphate reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.583
EDM29521.1
Adenylate cyclase, putative; COG1716 FOG: FHA domain.
    
  0.578
EDM27154.1
COG0307 Riboflavin synthase alpha chain.
    
  0.576
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.