STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26418.1Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. (686 aa)    
Predicted Functional Partners:
EDM28543.1
COG0631 Serine/threonine protein phosphatase.
  
  0.806
EDM29000.1
COG0515 Serine/threonine protein kinase.
  
   0.786
EDM26419.1
Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
   
   0.784
EDM25001.1
COG0515 Serine/threonine protein kinase.
  
   0.775
EDM26340.1
COG0515 Serine/threonine protein kinase.
  
     0.747
EDM25060.1
COG0515 Serine/threonine protein kinase.
  
     0.744
EDM26339.1
COG0515 Serine/threonine protein kinase.
  
   0.659
EDM26434.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
    
  0.599
radC
DNA repair protein RadC; COG2198 FOG: HPt domain.
    
  0.589
EDM27166.1
ATP-binding region, ATPase-like protein; COG0642 Signal transduction histidine kinase.
     
 0.575
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.