STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26459.1Probable L-fucose dehydrogenase; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (330 aa)    
Predicted Functional Partners:
EDM26458.1
Hypothetical protein.
 
     0.791
EDM29726.1
Amidohydrolase 2; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
  0.779
EDM26460.1
Alcohol dehydrogenase GroES-like protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
  
 0.734
EDM29180.1
Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
  0.709
EDM26463.1
Carbohydrate kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family.
    
  0.604
EDM26461.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
       0.542
EDM26462.1
Tagaturonate reductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
       0.535
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.529
EDM27205.1
Hypothetical protein.
  
     0.500
EDM26457.1
Phosphoribosylformylglycinamidine cyclo-ligase, putative; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
       0.483
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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