STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26486.1Type IV pilus biogenesis protein PilC; COG1459 Type II secretory pathway, component PulF. (414 aa)    
Predicted Functional Partners:
EDM26487.1
Twitching mobility protein PilT; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
   
 0.947
EDM26124.1
Putative GAF sensor protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 0.933
EDM28112.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 0.925
EDM27389.1
Putative GAF sensor protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.924
EDM25605.1
Prepilin peptidase; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
  
 0.863
EDM25233.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
 
 
 
 0.796
EDM25050.1
Twitching motility protein; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
   
 0.776
EDM24833.1
Pili retraction protein; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
   
 0.776
EDM24834.1
COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
 
   
 0.776
EDM28111.1
Secretion protein XqhA; COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
  
    0.672
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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