STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26493.1RfaE bifunctional protein, domains I & II; COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase. (475 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
  
 0.926
EDM27140.1
D,D-heptose 1,7-bisphosphate phosphatase; COG0241 Histidinol phosphatase and related phosphatases.
 
  
 0.848
EDM27573.1
ADP-heptose--LPS heptosyltransferase II, putative; COG0859 ADP-heptose:LPS heptosyltransferase.
 
  
 0.844
EDM29366.1
Lipopolysaccharide heptosyltransferase II; COG0859 ADP-heptose:LPS heptosyltransferase.
 
  
 0.844
EDM28895.1
ADP-L-glycero-D-manno-heptose-6-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
  0.757
EDM27986.1
D-lactate dehydrogenase, putative; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.605
EDM27663.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.605
accA
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.596
EDM26492.1
tonB-dependent receptor protein; COG1388 FOG: LysM repeat.
       0.596
EDM26494.1
Hypothetical protein.
       0.506
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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