STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26820.1Hypothetical protein; COG2963 Transposase and inactivated derivatives. (102 aa)    
Predicted Functional Partners:
EDM26821.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
 
     0.891
EDM27626.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.774
EDM29165.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.774
EDM29379.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.774
EDM26695.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.773
EDM26336.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.773
EDM28817.1
ISCc3, transposase OrfA; COG2963 Transposase and inactivated derivatives.
  
    0.772
EDM24846.1
Putative ISmav2-like transposase; COG2801 Transposase and inactivated derivatives.
  
     0.755
EDM26819.1
Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family).
       0.497
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.