STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM24971.1Putative 2-oxo-3-deoxygalactonate kinase; COG3734 2-keto-3-deoxy-galactonokinase. (290 aa)    
Predicted Functional Partners:
EDM24972.1
KDPG and KHG aldolase; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
  
 0.989
EDM27991.1
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 0.890
EDM24967.1
Putative transcriptional regulator, rpiR family protein; COG1737 Transcriptional regulators.
 
     0.808
EDM24969.1
COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.801
EDM24968.1
Probable N-acyl-D-glutamate deacylase protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase.
 
     0.782
EDM24970.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
EDM24973.1
Arylsulfatase (aryl-sulfate sulphohydrolase); COG3119 Arylsulfatase A and related enzymes.
       0.773
EDM27284.1
Putative regulatory protein, GntR family; COG1802 Transcriptional regulators.
  
     0.565
EDM24974.1
Hypothetical protein; COG2963 Transposase and inactivated derivatives.
       0.554
EDM24975.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
       0.554
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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