STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM24988.1Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. (289 aa)    
Predicted Functional Partners:
EDM26039.1
COG2207 AraC-type DNA-binding domain-containing proteins.
 
 0.908
EDM28090.1
Probable transcription regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.804
EDM26534.1
Transcriptional Regulator, AraC family protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.802
EDM27011.1
Two-component response regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.795
EDM28594.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.795
EDM25658.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.786
EDM28723.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.780
EDM27283.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
  
 0.751
EDM24980.1
Transcriptional regulator (AraC/XylS family) protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
0.732
EDM25839.1
Chorismate mutase/prephenate dehydratase; COG1605 Chorismate mutase.
  
 
 0.727
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.